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H. Kitaoka, Y. Park, J. Tschirren, J. M. Reinhardt, M. Sonka, G. McLennan, and E. A. Hoffman. Automated nomenclature labeling of the bronchial tree in 3D-CT lung images. In Medical Imaging Computing and Computer Assisted Intervention, vol. 2489 of Lecture Notes in Computer Science, pp. 1-11, Tokyo, 2002.
Abstract:
A nomenclature labeling algorithm for the human bronchial tree down to sub-lobar segments is proposed, as a means of inter and intra subject comparisons for the evaluation of lung structure and function. The algorithm is a weighted maximum clique search of an association graph between a reference tree and an object tree. The adjacency between nodes in the association graph is defined so as to reflect the consistency between the bronchial name in the reference tree and the node connectivity in the object tree. Nodes in the association graph are weighted according to the similarity between two tree nodes in the respective trees. This algorithm is robust to various branching patterns and false branches that arise during segmentation processing. Experiments have been performed for nine airway trees extracted automatically from clinical 3D-CT data, where approximately 250 branches were contained. Of these, 95% were accurately named.
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Keywords:
airways
lung
Other publications by:
H. Kitaoka,
Y. Park,
J. Tschirren,
J. M. Reinhardt,
M. Sonka,
G. McLennan,
E. A. Hoffman
Related journal papers:
- J. M. Reinhardt, N. D. D'Souza, and E. A. Hoffman. Accurate Measurement of Intra-Thoracic Airways. IEEE Trans. Medical Imaging, vol. 16, no. 6, pp. 820-827, 1997.
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- J. M. Reinhardt and E. A. Hoffman. Quantitative Pulmonary Imaging: Spatial and Temporal Considerations in HRCT. Acad. Radiol., vol. 5, no. 8, pp. 539-546, 1998.
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- S. Hu, E. A. Hoffman, and J. M. Reinhardt. Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Trans. Medical Imaging, vol. 20, no. 6, pp. 490-498, 2001.
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- C. P. Rooney, M. Suter, G. McLennan, M. Donnelley, J. M. Reinhardt, A. Delsing, E. A. Hoffman, and J. Zabner. Laser Fluorescence Bronchoscopy for Detection of Fluorescent Reporter Genes in Airway Epithelia. Gene Therapy, vol. 9, no. 23, pp. 1639-1644, 2002.
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- B. Li, G. E. Christensen, G. McLennan, E. A. Hoffman, and J. M. Reinhardt. Establishing a normative atlas of the human lung: Inter-subject warping and registration of volumetric CT. Acad. Radiol., vol. 10, no. 3, pp. 255-265, 2003.
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Related conference papers:
- J. Tschirren, K. Palagyi, J. M. Reinhardt, E. A. Hoffman, and M. Sonka. Segmentation, skeletonization, and branchpoint matching: A fully automated quantitative evaluation of human intrathoracic airway trees. In Medical Imaging Computing and Computer Assisted Intervention, vol. 2489 of Lecture Notes in Computer Science, pp. 12-19, Tokyo, 2002.
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- P. Lo, B. van Ginneken, J. M. Reinhardt, and M. de Bruijne. Extraction of Airways from CT (EXACT'09). In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 175-189, London, UK, 2009.
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- J. Tschirren, T. Yavarna, and J. M. Reinhardt. Airway Segmentation Framework for Clinical Environments. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 227-238, London, UK, 2009.
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- N. D. D'Souza, J. M. Reinhardt, and E. A. Hoffman. ASAP: Interactive Quantification of 2D Airway Geometry. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 2709, pp. 180-196, Newport Beach, CA, 1996.
(details)
- R. A. Chiplunkar, J. M. Reinhardt, and E. A. Hoffman. Segmentation and Quantification of the Primary Human Airway Tree from 3-D X-ray CT. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3033, pp. 403-414, Newport Beach, CA, 1997.
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Related theses:
- D. Aykac. Segmentation and analysis of the human airway tree from 3D X-ray CT images. MS thesis, The University of Iowa, Iowa City, IA, 2000.
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- K. Ding. Registration-based regional lung mechanical analysis. MS thesis, The University of Iowa, Iowa City, IA, 2008.
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- D. Gopalakrishnan. Color analysis of the human airway wall. MS thesis, The University of Iowa, Iowa City, IA, 2003.
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- B. Li. The construction of a normative human lung atlas by inter-subject registration and warping of CT images. PhD thesis, The University of Iowa, Iowa City, IA, 2004.
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- Y. Pan. Estimation of regional lung expansion via 3D image registration. MS thesis, The University of Iowa, Iowa City, IA, 2005.
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