• The University of Iowa
• Iowa Institute for Biomedical Imaging
• College of Engineering
• Department of Biomedical Engineering

• ABOUT
• PEOPLE
• RESEARCH
• PUBLICATIONS
• NEWS
• RELATED LINKS
• CONTACT

Year-by-Year Publication Index

• 2009

  • Journal papers:
    • S. Ukil and J. M. Reinhardt. Anatomy-guided lung lobar surface detection in X-ray CT images. IEEE Trans. Medical Imaging, vol. 28, no. 2, pp. 202-214, 2009. (details)
    • E. A. Hoffman, R. Jiang, H. Baumhauer, M. A. Brooks, J. J. Carr, R. Detrano, J. M. Reinhardt, J. Rodriguez, K. Stukovsky, N. Wong, and R. G. Barr. Reproducibility and validity of lung density measures from cardiac CT Scans -- The Multi-Ethnic Study of Atherosclerosis (MESA) Lung Study. Acad. Radiol., vol. 16, no. 6, pp. 689-699, 2009. (details)
    • T. E. Robinson, F. R. Long, P. Raman, P. Saha, M. J. Edmond, J. M. Reinhardt, R. Raman, and A. S. Brody. An airway phantom to standardize CT acquisition in multi-center clinical trials. Acad. Radiol., vol. 16, no. 9, pp. 1134-1141, 2009. (details)
    • T. C. Ryken, B. D. Owen, G. E. Christensen, and J. M. Reinhardt. Image based drill-templates for cervical pedicle screw placement. J Neurosurg Spine, vol. 10, no. 1, pp. 21-26, 2009. (details)
    • T. C. Ryken, B. D. Owen, G. E. Christensen, and J. M. Reinhardt. Engineering patient-specific drill templates and bioabsorbable posterior cervical plates: a feasibility study. J Neurosurg Spine, vol. 10, no. 2, pp. 129-132, 2009. (details)
  • Conference papers:
    • K. Ding, Y. Yin, K. Cao, G. E. Christensen, C.-L. Lin, E. A. Hoffman, and J. M. Reinhardt. Evaluation of Lobar Biomechanics during Respiration using Image Registration. In G.-Z. Yang, D. J. Hawkes, D. Rueckert, A. Noble, and C. Taylor, eds., Medical Imaging Computing and Computer Assisted Intervention, vol. 5761 of Lecture Notes in Computer Science, pp. 739-746, London, UK, 2009. (details)
    • K. Ding, K. Cao, G. E. Christensen, E. A. Hoffman, and J. M. Reinhardt. Registration-based regional lung mechanical analysis: Retrospectively reconstructed dynamic imaging versus static breath-hold image acquisition. In X. P. Hu and A. V. Clough, eds., Proc. SPIE Conf. Medical Imaging, vol. 7262, Lake Buena Vista, FL, 2009. (details)
    • J. Tschirren, T. Yavarna, and J. M. Reinhardt. Airway Segmentation Framework for Clinical Environments. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 227-238, London, UK, 2009. (details)
    • X. Artaechevarria, D. Perez-Martin, J. M. Reinhardt, A. Munoz-Barrutia, and C. Ortiz-de-Solarzano. Automated Quantitative Analysis of a Mouse Model of Chronic Pulmonary Inflammation using Micro X-ray Computed Tomography. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 115-124, London, UK, 2009. (details)
    • P. Lo, B. van Ginneken, J. M. Reinhardt, and M. de Bruijne. Extraction of Airways from CT (EXACT'09). In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 175-189, London, UK, 2009. (details)
    • K. Cao, G. E. Christensen, K. Ding, and J. M. Reinhardt. Intensity-and-Landmark-Driven, Inverse Consistent, B-Spline Registration and Analysis for Lung Imagery. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, J. R. McClelland, K. Mori, A. Reeves, and J. M. Reinhardt, eds., Second International Workshop on Pulmonary Image Analysis, pp. 137-148, London, UK, 2009. (details)

• 2008

  • Theses:
    • S. Lee. A study of ophthalmologic imaging distortion for retinal image registration and validation. PhD thesis, The University of Iowa, Iowa City, IA, 2008. (details)
    • P. Kellen. Computer automated image analysis of fluoroscopic swallowing studies. MS thesis, The University of Iowa, Iowa City, IA, 2008. (details)
    • S. V. Bodas. Improved association graph matching of intra-patient airway trees. MS thesis, The University of Iowa, Iowa City, IA, 2008. (details)
    • K. Ding. Registration-based regional lung mechanical analysis. MS thesis, The University of Iowa, Iowa City, IA, 2008. (details)
  • Journal papers:
    • M. Suter, J. M. Reinhardt, and G. McLennan. Integrated CT/bronchoscopy in the central airways: Preliminary results. Acad. Radiol., vol. 15, no. 6, pp. 786-798, 2008. (details)
    • M. K. Fuld, R. B. Easley, O. Saba, D. Chon, J. M. Reinhardt, E. A. Hoffman, and B. A. Simon. CT measured regional specific volume change reflects regional specific ventilation in supine sheep. J. Applied Physiology, vol. 104, no. 4, pp. 1177-1184, 2008. (details)
    • B. Li, G. E. Christensen, G. McLennan, E. A. Hoffman, and J. M. Reinhardt. Pulmonary CT image registration and warping for tracking tissue deformation during the respiratory cycle through 3-D Consistent Image Registration. Medical Physics, vol. 35, no. 12, pp. 5575-5583, 2008. (details)
    • J. M. Reinhardt, K. Ding, K. Cao, G. E. Christensen, E. A. Hoffman, and S. V. Bodas. Registration-based estimates of local lung tissue expansion compared to xenon-CT measures of specific ventilation. Medical Image Analysis, vol. 12, no. 6, pp. 752-763, 2008. (details)
  • Conference papers:
    • J. Guo, M. K. Fuld, S. K. Alford, J. M. Reinhardt, and E. A. Hoffman. Pulmonary Analysis Software Suite 9.0: Integrating quantitative measures of function with structural analyses. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, K. Mori, and J. M. Reinhardt, eds., First International Workshop on Pulmonary Image Analysis, pp. 283-292, New York, 2008. (details)
    • K. Ding, K. Cao, G. E. Christensen, M. L. Raghavan, E. A. Hoffman, and J. M. Reinhardt. Registration-based lung tissue mechanics assessment during tidal breathing. In M. Brown, M. de Bruijne, B. van Ginneken, A. Kiraly, J.-M. Kuhnigk, C. Lorenz, K. Mori, and J. M. Reinhardt, eds., First International Workshop on Pulmonary Image Analysis, pp. 63-72, New York, 2008. (details)
    • S. Lee, M. Abramoff, and J. M. Reinhardt. Retinal image mosaicing using the radial distortion correction model. In J. M. Reinhardt and J. P. Pluim, eds., Proc. SPIE Conf. Medical Imaging, vol. 6914, San Diego, CA, 2008. (details)
    • P. Kellen, D. Becker, J. M. Reinhardt, and D. van Daele. Tracking the motion of the hyoid bone in videofluoroscopic swallowing studies. In J. M. Reinhardt and J. P. Pluim, eds., Proc. SPIE Conf. Medical Imaging, vol. 6914, San Diego, CA, 2008. (details)
    • S. Miyawaki, G. Constantinescu, T. Nakato, and J. M. Reinhardt. A Numerical Study Of Flow Around Freshwater Mussels. In River flow 2008: International conference on fluvial hydraulics, 2008. (details)

• 2007

  • Journal papers:
    • L. A. Meinel, A. H. Stolpen, K. S. Berbaum, L. L. Fajardo, and J. M. Reinhardt. Breast MRI Lesion Classification: Improved Performance of Human Readers with a Backpropagation Neural Network Computer-Aided Diagnosis (CAD) System. J. Magn. Res. Imaging, vol. 25, no. 1, pp. 85-95, 2007. (details)
    • B. D. Owen, G. E. Christensen, J. M. Reinhardt, and T. C. Ryken. Rapid prototype patient-specific drill template for cervical pedicle screw placement. Computer Aided Surgery, vol. 12, no. 5, pp. 303-308, 2007. (details)
  • Conference papers:
    • M. Sonka, J. Tschirren, S. Ukil, X. Zhang, Y. Xu, J. M. Reinhardt, E. van Beek, G. McLennan, and E. A. Hoffman. Pulmonary CT image analysis and computer aided detection. In Biomedical Imaging: From Nano to Macro, ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging, pp. 500-503, 2007. (details)
    • J. M. Reinhardt, G. E. Christensen, E. A. Hoffman, K. Ding, and K. Cao. Registration-derived estimates of local lung expansion as surrogates for regional ventilation. In N. Karssemeijer and B. Lelieveldt , eds., Information Processing in Medical Imaging, vol. 4584 of Lecture Notes in Computer Science, pp. 763-774, Kerkrade, The Netherlands, 2007. (details)
    • S. Lee, J. M. Reinhardt, and M. Abramoff. Validation of Retinal Image Registration Algorithms by a Projective Imaging Distortion Model. In Proc IEEE Eng Med Biol Soc, vol. 1, pp. 6471-6474, 2007. (details)
    • S. Lee, M. Abramoff, and J. M. Reinhardt. Feature-based pairwise retinal image registration by radial distortion correction. In J. P. Pluim and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 6512, San Diego, CA, 2007. (details)
    • J. de Ryk, J. Weydert, G. E. Christensen, J. Thiesse, E. Namati, J. M. Reinhardt, E. A. Hoffman, and G. McLennan. Three dimensional histopathology of lung cancer with multimodality image registration. In J. P. Pluim and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 6512, San Diego, CA, 2007. (details)
    • L. Shi, J. Thiesse, G. McLennan, E. A. Hoffman, and J. M. Reinhardt. Three-Dimensional Murine Airway Segmentation in Micro-CT Images. In J. P. Pluim and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 6512, San Diego, CA, 2007. (details)

• 2006

  • Theses:
    • S. Ukil. Anatomy-guided lung lobe segmentation and fissure analysis in X-ray CT images. PhD thesis, The University of Iowa, Iowa City, IA, 2006. (details)
  • Journal papers:
    • L. Zhang, E. A. Hoffman, and J. M. Reinhardt. Lung lobe segmentation in volumetric X-ray CT images. IEEE Trans. Medical Imaging, vol. 25, no. 1, pp. 1-16, 2006. (details)
  • Conference papers:
    • S. Ukil, M. Sonka, and J. M. Reinhardt. Automatic segmentation of pulmonary fissures in X-ray CT images using anatomic guidance. In J. M. Reinhardt and J. P. Pluim, eds., Proc. SPIE Conf. Medical Imaging, vol. 6144, pp. 213-223, San Diego, CA, 2006. (details)
    • J. de Ryk, J. Thiesse, J. M. Reinhardt, E. A. Hoffman, and G. McLennan. Establishing multi-modality datasets with the incorporation of 3D histopathology for soft tissue imaging. In J. M. Reinhardt and J. P. Pluim, eds., Proc. SPIE Conf. Medical Imaging, vol. 6144, pp. 1028-1035, San Diego, CA, 2006. (details)

• 2005

  • Theses:
    • L. Arbach. Development of a computer-aided diagnostic system for breast MRI lesion classification. PhD thesis, The University of Iowa, Iowa City, IA, 2005. (details)
    • Y. Pan. Estimation of regional lung expansion via 3D image registration. MS thesis, The University of Iowa, Iowa City, IA, 2005. (details)
  • Journal papers:
    • O. Saba, D. Chon, K. C. Beck, G. McLennan, J. Sieren, J. M. Reinhardt, and E. A. Hoffman. Static Versus Prospective Gated Non-breath Hold Volumetric MDCT Imaging of the Lungs. Acad. Radiol., vol. 12, no. 11, pp. 1371-1384, 2005. (details)
    • S. Ukil and J. M. Reinhardt. Smoothing Lung Segmentation Surfaces in 3D X-ray CT Images using Anatomic Guidance. Acad. Radiol., vol. 12, no. 12, pp. 1502-1511, 2005. (details)
    • B. A. Simon, G. E. Christensen, D. A. Low, and J. M. Reinhardt. Computed Tomography Studies of Lung Mechanics. Proc Am Thorac Soc, vol. 2, no. 6, pp. 517-521, 2005. (details)
    • M. Suter, J. M. Reinhardt, P. Montague, P. Taft, J. Lee, J. Zabner, and G. McLennan. Bronchoscopic imaging of the pulmonary mucosal vasculature responses to inflammatory mediators. J. Biomed. Optics, vol. 10, no. 3, pg. 34013, 2005. (details)
    • M. Suter, G. McLennan, J. M. Reinhardt, D. Riker, and E. A. Hoffman. Macro-optical color assessment of the pulmonary airways with subsequent three-dimensional multidetector-x-ray-computed-tomography assisted display. J. Biomed. Optics, vol. 10, no. 5, pg. 51703, 2005. (details)
  • Conference papers:
    • M. Suter, J. M. Reinhardt, E. A. Hoffman, and G. McLennan. 3D pulmonary airway color image reconstruction via shape from shading and virtual bronchoscopy imaging techniques. In J. M. Fitzpatrick and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 5747, pp. 775-763, San Diego, CA, 2005. (details)
    • S. Ukil, E. A. Hoffman, and J. M. Reinhardt. Automatic lung lobe segmentation in X-ray CT images by 3D watershed transform using anatomic information from the segmented airway tree. In J. M. Fitzpatrick and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 5747, pp. 556-567, San Diego, CA, 2005. (details)
    • M. Suter, J. M. Reinhardt, D. Easker, D. Riker, E. A. Hoffman, and G. McLennan. Classification of pulmonary airway disease based on mucosal color analysis. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5746, pp. 465-473, San Diego, CA, 2005. (details)
    • Y. Pan, D. Kumar, E. A. Hoffman, G. E. Christensen, G. McLennan, J. H. Song, A. Ross, B. A. Simon, and J. M. Reinhardt. Regional lung expansion via 3D image registration. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5746, pp. 453-464, San Diego, CA, 2005. (details)
    • Z. Markowitz, M. Loew, and J. M. Reinhardt. The use and benefit of stereology in choosing a CT scanning protocol for the lung. In J. M. Fitzpatrick and J. M. Reinhardt, eds., Proc. SPIE Conf. Medical Imaging, vol. 5747, pp. 667-674, San Diego, CA, 2005. (details)
    • J. Thiesse, J. M. Reinhardt, J. de Ryk, J. Leinen, W. Recheis, E. A. Hoffman, and G. McLennan. Three-dimensional visual truth of the normal airway tree for use as a quantitative comparison to micro-CT reconstructions. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5746, pp. 369-383, San Diego, CA, 2005. (details)
    • A. Kiraly, J. M. Reinhardt, E. A. Hoffman, G. McLennan, and W. E. Higgins. Virtual bronchoscopy for quantitative airway analysis. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5746, pp. 369-383, San Diego, CA, 2005. (details)
    • H. Ding, Y. Jiang, M. Furmanczyk, A. Przekwas, and J. M. Reinhardt. Simulation of Human Lung Respiration Process Using 3-D CFD with Macro Air Sac System Model. In WMC 2005 Fifteenth International Conference on Health Sciences Simulation, 2005. (details)

• 2004

  • Theses:
    • B. Li. The construction of a normative human lung atlas by inter-subject registration and warping of CT images. PhD thesis, The University of Iowa, Iowa City, IA, 2004. (details)
  • Journal papers:
    • E. A. Hoffman, A. V. Clough, G. E. Christensen, C.-L. Lin, G. McLennan, J. M. Reinhardt, B. A. Simon, M. Sonka, M. Tawhai, E. van Beek, and G. Wang. The comprehensive imaging-based analysis of the lung: A forum for team science. Acad. Radiol., vol. 11, no. 12, pp. 1370-1380, 2004. (details)
    • M. Tawhai, P. Hunter, J. Tschirren, J. M. Reinhardt, G. McLennan, and E. A. Hoffman. CT-based geometry analysis and finite element models of the human and ovine bronchial tree. J. Applied Physiology, vol. 97, no. 6, pp. 2310-2321, 2004. (details)
    • M. Suter, J. Tschirren, J. M. Reinhardt, M. Sonka, E. A. Hoffman, W. E. Higgins, and G. McLennan. Evaluation of the human airway with multi-detector X-ray computed tomography and optical imaging. Physiological Measurement, vol. 25, no. 4, pp. 837-847, 2004. (details)
  • Conference papers:
    • L. Arbach, A. H. Stolpen, and J. M. Reinhardt. Classification of breast MRI lesions using a backpropagation neural network (BNN). In 2004 International Symposium on Biomedical Imaging, pp. 253-256, 2004. (details)
    • S. Krishnan, K. C. Beck, J. M. Reinhardt, K. A. Carlson, B. A. Simon, R. K. Albert, and E. A. Hoffman. Regional lung ventilation from volumetric CT scans using image warping functions. In 2004 International Symposium on Biomedical Imaging, pp. 792-795, 2004. (details)
    • L. Shi, E. A. Hoffman, and J. M. Reinhardt. Segmentation of the Ovine Lung in 3D CT Images. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5369, pp. 455-463, San Diego, CA, 2004. (details)
    • S. Ukil and J. M. Reinhardt. Smoothing Lung Segmentation Surfaces in 3D X-ray CT Images using Anatomic Guidance. In Proc. SPIE Conf. Medical Imaging, vol. 5370, pp. 1066-1075, 2004. (details)
    • M. Suter, J. M. Reinhardt, M. Sonka, W. E. Higgins, E. A. Hoffman, and G. McLennan. Three-dimensional true color topographical analysis of the pulmonary airways. In A. Amini and A. Manduca, eds., Proc. SPIE Conf. Medical Imaging, vol. 5369, pp. 189-198, San Diego, CA, 2004. (details)
    • J. de Ryk, E. Namati, J. M. Reinhardt, C. Piker, Y. Xu, L. Liu, E. A. Hoffman, and G. McLennan. A whole organ serial sectioning and imaging system for correlation of pathology to computer tomography. In J.-A. Conchello, C. J. Cogswell, and T. Wilson, eds., Proc. SPIE Conf. Photonics West, vol. 5324, pp. 224-234, San Jose, CA, 2004. (details)

• 2003

  • Theses:
    • D. Gopalakrishnan. Color analysis of the human airway wall. MS thesis, The University of Iowa, Iowa City, IA, 2003. (details)
  • Journal papers:
    • D. Aykac, E. A. Hoffman, G. McLennan, and J. M. Reinhardt. Segmentation and analysis of the human airway tree from three-dimensional X-Ray CT images. IEEE Trans. Medical Imaging, vol. 22, no. 8, pp. 940-950, 2003. (details)
    • B. Li, G. E. Christensen, G. McLennan, E. A. Hoffman, and J. M. Reinhardt. Establishing a normative atlas of the human lung: Inter-subject warping and registration of volumetric CT. Acad. Radiol., vol. 10, no. 3, pp. 255-265, 2003. (details)
    • E. A. Hoffman, J. M. Reinhardt, M. Sonka, B. A. Simon, J. Guo, O. Saba, D. Chon, S. Samrah, H. Shikata, J. Tschirren, K. Palagyi, K. C. Beck, and G. McLennan. Characterization of the Interstitial Lung Diseases via Density-Based and Texture-Based Analysis of Computed Tomography Images of Lung Structure and Function. Acad. Radiol., vol. 10, no. 10, pp. 1104-1118, 2003. (details)
    • O. Saba, E. A. Hoffman, and J. M. Reinhardt. Maximizing Quantitative Accuracy of Lung Airway Lumen and Wall Measures Obtained from X-ray CT Imaging. J. Applied Physiology, vol. 95, pp. 1063-1095, 2003. (details)
  • Conference papers:
    • L. Arbach, L. Bennett, J. M. Reinhardt, and G. Fallouh. Mammogram Breast Mass Classification with Backpropagation Neural Network. In IEEE Canadian Conference on Electrical and Computer Engineering, vol. 3, pp. 1441-1444, 2003. (details)
    • L. Zhang, E. A. Hoffman, and J. M. Reinhardt. Atlas-Driven Lung Lobe Segmentation in Volumetric X-ray CT Images. In M. Sonka and J. M. Fitzpatrick, eds., Proc. SPIE Conf. Medical Imaging, vol. 5032, pp. 309-319, San Diego, CA, 2003. (details)
    • L. Arbach, L. Bennett, J. M. Reinhardt, and G. Fallouh. Breast mass classification: Comparison between human readers and a back-propagation neural network. In M. Sonka and J. M. Fitzpatrick, eds., Proc. SPIE Conf. Medical Imaging, vol. 5032, pp. 810-818, San Diego, CA, 2003. (details)

• 2002

  • Theses:
    • L. Zhang. Atlas-driven lung lobe segmentation in volumetric X-ray CT images. PhD thesis, The University of Iowa, Iowa City, IA, 2002. (details)
  • Journal papers:
    • A. Kiraly, W. E. Higgins, G. McLennan, E. A. Hoffman, and J. M. Reinhardt. 3D human airway segmentation for clinical virtual bronchoscopy. Acad. Radiol., vol. 9, no. 10, pp. 1153-1168, 2002. (details)
    • L. Arbach, G. Fallouh, J. M. Reinhardt, and L. Bennett. Distinguishing between malignant and nonmalignant breast masses from mammograms using artificial intelligence techniques. Bassel Al-Assad J. for Engineering Science, vol. 16, pp. 103-121, 2002. (details)
    • C. P. Rooney, M. Suter, G. McLennan, M. Donnelley, J. M. Reinhardt, A. Delsing, E. A. Hoffman, and J. Zabner. Laser Fluorescence Bronchoscopy for Detection of Fluorescent Reporter Genes in Airway Epithelia. Gene Therapy, vol. 9, no. 23, pp. 1639-1644, 2002. (details)
  • Conference papers:
    • J. Guo, J. M. Reinhardt, H. Kitaoka, L. Zhang, G. McLennan, and E. A. Hoffman. Integrated system for CT-Based Assessment of Parenchymal Lung Disease. In 2002 International Symposium on Biomedical Imaging, pp. 871-874, 2002. (details)
    • H. Kitaoka, Y. Park, J. Tschirren, J. M. Reinhardt, M. Sonka, G. McLennan, and E. A. Hoffman. Automated nomenclature labeling of the bronchial tree in 3D-CT lung images. In Medical Imaging Computing and Computer Assisted Intervention, vol. 2489 of Lecture Notes in Computer Science, pp. 1-11, Tokyo, 2002. (details)
    • J. Tschirren, K. Palagyi, J. M. Reinhardt, E. A. Hoffman, and M. Sonka. Segmentation, skeletonization, and branchpoint matching: A fully automated quantitative evaluation of human intrathoracic airway trees. In Medical Imaging Computing and Computer Assisted Intervention, vol. 2489 of Lecture Notes in Computer Science, pp. 12-19, Tokyo, 2002. (details)
    • B. Li, G. E. Christensen, J. Dill, E. A. Hoffman, and J. M. Reinhardt. 3-D inter-subject warping and registration of pulmonary CT images for a human lung model. In A. V. Clough and C.-T. Chen, eds., Proc. SPIE Conf. Medical Imaging, vol. 4683, pp. 324-335, San Diego, CA, 2002. (details)
    • A. Kiraly, W. E. Higgins, E. A. Hoffman, G. McLennan, and J. M. Reinhardt. 3D human airway segmentation for virtual bronchoscopy. In A. V. Clough and C.-T. Chen, eds., Proc. SPIE Conf. Medical Imaging, vol. 4683, pp. 16-29, San Diego, CA, 2002. (details)
    • D. Gopalakrishnan, G. McLennan, M. Donnelley, A. Delsing, M. Suter, D. Flaherty, J. Zabner, E. A. Hoffman, and J. M. Reinhardt. Color bronchoscopic analysis of the human airway tree. In A. V. Clough and C.-T. Chen, eds., Proc. SPIE Conf. Medical Imaging, vol. 4683, pp. 341-351, San Diego, CA, 2002. (details)

• 2001

  • Journal papers:
    • S. Hu, E. A. Hoffman, and J. M. Reinhardt. Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Trans. Medical Imaging, vol. 20, no. 6, pp. 490-498, 2001. (details)
  • Conference papers:
    • J. M. Reinhardt, J. Guo, L. Zhang, D. Bilgen, S. Hu, R. Uppaluri, R. M. Long, O. Saba, G. McLennan, M. Sonka, and E. A. Hoffman. Integrated System for Objective Assessment of Global and Regional Lung Structure. In Medical Imaging Computing and Computer Assisted Intervention, vol. 2208 of Lecture Notes in Computer Science, pp. 1384-1385, Utrecht, 2001. (details)
    • B. Li and J. M. Reinhardt. Automatic generation of 3-D shape models and their application to tomographic image segmentation. In M. Sonka and K. M. Hansen, eds., Proc. SPIE Conf. Medical Imaging, vol. 4322, pp. 311-322, San Diego, CA, 2001. (details)
    • F. Li, C.-W. Chen, E. A. Hoffman, and J. M. Reinhardt. Evaluation and application of 3D lung warping and registration model using HRCT images. In C.-T. Chen and A. V. Clough, eds., Proc. SPIE Conf. Medical Imaging, vol. 4321, pp. 234-243, San Diego, CA, 2001. (details)
    • L. Zhang, E. A. Hoffman, and J. M. Reinhardt. Lung lobar segmentation by graph search with 3D shape constraints. In C.-T. Chen and A. V. Clough, eds., Proc. SPIE Conf. Medical Imaging, vol. 4321, pp. 204-215, San Diego, CA, 2001. (details)

• 2000

  • Theses:
    • O. Saba. Accurate estimation of airway geometry with tilt angle estimation from 2D HRCT slices. MS thesis, The University of Iowa, Iowa City, IA, 2000. (details)
    • D. Aykac. Segmentation and analysis of the human airway tree from 3D X-ray CT images. MS thesis, The University of Iowa, Iowa City, IA, 2000. (details)
  • Journal papers:
    • J. M. Reinhardt, A. J. Wang, T. P. Weldon, and W. E. Higgins. Cue-Based Segmentation of 4D Cardiac Image Sequences. Comp. Vision and Image Understanding, vol. 77, no. 2, pp. 251-262, 2000. (details)
  • Conference papers:
    • L. Zhang and J. M. Reinhardt. 3D pulmonary CT image registration with a standard lung atlas. In C.-T. Chen and A. V. Clough, eds., Proc. SPIE Conf. Medical Imaging, vol. 3978, pp. 67-77, San Diego, CA, 2000. (details)
    • O. Saba, E. A. Hoffman, and J. M. Reinhardt. Computed tomographic-based estimation of airway size with correction for scanned plane tilt angle. In C.-T. Chen and A. V. Clough, eds., Proc. SPIE Conf. Medical Imaging, vol. 3978, pp. 58-66, San Diego, CA, 2000. (details)

• 1999

  • Conference papers:
    • L. Zhang and J. M. Reinhardt. Detection of Lung Lobar Fissures using Fuzzy Logic. In Proc. SPIE Conf. Medical Imaging, vol. 3660, pp. 188-199, 1999. (details)

• 1998

  • Journal papers:
    • J. M. Reinhardt and W. E. Higgins. Paradigm for Shape-Based Image Analysis. Optical Engineering, vol. 37, no. 2, pp. 570-581, 1998. (details)
    • J. M. Reinhardt and E. A. Hoffman. Quantitative Pulmonary Imaging: Spatial and Temporal Considerations in HRCT. Acad. Radiol., vol. 5, no. 8, pp. 539-546, 1998. (details)
  • Conference papers:
    • R. D. Swift, W. E. Higgins, E. A. Hoffman, G. McLennan, and J. M. Reinhardt. Automatic axis generation for 3D virtual-bronchoscopic image assessment. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3337, pp. 73-84, San Diego, CA, 1998. (details)

• 1997

  • Journal papers:
    • J. M. Reinhardt, N. D. D'Souza, and E. A. Hoffman. Accurate Measurement of Intra-Thoracic Airways. IEEE Trans. Medical Imaging, vol. 16, no. 6, pp. 820-827, 1997. (details)
  • Conference papers:
    • J. M. Reinhardt, S. A. Raab, N. D. D'Souza, and E. A. Hoffman. Intra-thoracic airway measurement: Ex vivo validation. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3033, pp. 69-80, Newport Beach, CA, 1997. (details)
    • J. M. Reinhardt, W. Park, E. A. Hoffman, and M. Sonka. Intrathoracic airway wall detection using graph search with CT scanner PSF information. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3033, pp. 93-101, Newport Beach, CA, 1997. (details)
    • E. A. Hoffman, J. M. Reinhardt, J. K. Tajik, and B. Q. Tran. Physiologic assessment of the lung via X-ray CT. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3033, Newport Beach, CA, 1997. (details)
    • R. A. Chiplunkar, J. M. Reinhardt, and E. A. Hoffman. Segmentation and Quantification of the Primary Human Airway Tree from 3-D X-ray CT. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 3033, pp. 403-414, Newport Beach, CA, 1997. (details)

• 1996

  • Journal papers:
    • J. M. Reinhardt and W. E. Higgins. Comparison between the Morphological Skeleton and Morphological Shape Decomposition. IEEE Trans. Patt. Anal. Machine Intell., vol. 18, no. 9, pp. 951-957, 1996. (details)
    • J. M. Reinhardt and W. E. Higgins. Efficient Morphological Shape Representation. IEEE Trans. Image Proc., vol. 5, no. 1, pp. 89-101, 1996. (details)
  • Conference papers:
    • N. D. D'Souza, J. M. Reinhardt, and E. A. Hoffman. ASAP: Interactive Quantification of 2D Airway Geometry. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 2709, pp. 180-196, Newport Beach, CA, 1996. (details)
    • W. E. Higgins, A. J. Wang, and J. M. Reinhardt. Semi-automatic 4D analysis of cardiac image sequences. In E. A. Hoffman, ed., Proc. SPIE Conf. Medical Imaging, vol. 2709, pp. 359-372, Newport Beach, CA, 1996. (details)

• 1994

  • Conference papers:
    • J. M. Reinhardt and W. E. Higgins. Automatic Generation of Image-Segmentation Processes. In Proc. IEEE Int. Conf. Image Processing, vol. III, pp. 791-795, 1994. (details)
    • J. M. Reinhardt and W. E. Higgins. Shape Representation: Comparison between the Morphological Skeleton and Morphological Shape Decomposition. In Proc. IEEE Int. Conf. Image Processing, vol. I, pp. 91-95, 1994. (details)
    • J. M. Reinhardt and W. E. Higgins. Strategy for shape-based image analysis. In Proc. IEEE Int. Conf. Image Processing, vol. I, pp. 502-505, 1994. (details)
    • W. E. Higgins, W. L. Sharp, M. W. Hansen, and J. M. Reinhardt. A graphical user interface system for 3D medical image analysis. In Y. Kim, ed., Proc. SPIE Conf. Medical Imaging, vol. 2164, Newport Beach, CA, 1994. (details)
    • W. E. Higgins, J. M. Reinhardt, and W. L. Sharp. Semi-automatic construction of 3D medical image-segmentation processes. In R. A. Robb, ed., Proc. SPIE Conf. Visual. in Biomed. Comp., vol. 2359, pp. 59-71, Rochester, MN, 1994. (details)

• 1993

  • Conference papers:
    • J. M. Reinhardt and W. E. Higgins. Toward Efficient Morphological Shape Representation. In Proc. IEEE Int. Conf. Acoust., Speech, Signal Processing, vol. V, pp. 125-128, 1993. (details)
    • J. M. Reinhardt and W. E. Higgins. Flexible Search-Based Approach for Morphological Shape Decomposition. In B. G. Haskell and H.-M. Hang, eds., Proc. SPIE Conf. Visual Comm., vol. 2094, pp. 1424-1435, Cambridge, MA, 1993. (details)

© Copyright 2008, 2009 The University of Iowa. All rights reserved.